Bioinformatics

Guides

• Disholcaspis prehensa

  clasping twig gall wasp

  Disholcaspis prehensa is a gall-inducing cynipid wasp native to California that induces distinctive galls on scrub oak and leather oak. The species exhibits heterogony, alternating between sexual and asexual generations that produce two morphologically different gall types. The asexual generation forms conspicuous mushroom-shaped twig galls with clasping bases, while the sexual generation produces small, hidden bud galls.

  gall-waspcynipidheterogonyparthenogenesisoak-gallCalifornia-endemicant-mutualismDisholcaspisCynipidaeHymenopteraQuercusinduced-plant-structurephloem-sap-exudationbiological-mutualismseasonal-dimorphismsexual-dimorphismgall-dimorphismagamic-generationsexual-generationclasping-twig-gallbud-galltwig-gallnative-California-speciesscrub-oakleather-oakparasitoid-defenseant-plant-interactioninsect-plant-interactionplant-manipulationevolution-of-asexualityWeld-1957Zootaxa-4859molecular-systematicshost-plant-specificityCynipinioak-woodlandchaparralinsect-gallgall-morphologygall-colorationsun-exposure-effectslarval-chamberemergence-timingspring-emergencelate-winter-emergencegall-developmentoviposition-behavioregg-laying-in-budsegg-laying-in-twigsfemale-only-generationwingless-femalewinged-sexual-generationgall-size-dimorphismgall-shape-dimorphismhidden-gallexposed-gallgall-wasp-life-cyclecynipid-biologygall-wasp-taxonomygall-wasp-identificationgall-wasp-ecologyinsect-plant-coevolutionplant-growth-manipulationhormone-mediated-gall-inductionvenom-glandaccessory-glandsecretory-structuresgall-induction-mechanismgall-chemistryphloem-saphoneydewant-attractionant-protectionparasitoid-waspnatural-enemy-defenseindirect-defensemutualistic-interactiontrophic-cascadecommunity-ecologyspecies-interactionecosystem-engineerhabitat-modificationfood-webinsect-diversityCalifornia-biodiversityendemic-insectregional-endemismoak-specialistplant-specialistmonophagousoligophagoushost-rangehost-plant-evolutiongall-wasp-radiationadaptive-radiationevolutionary-innovationreproductive-strategyasexual-reproductionthelytokyarrhenotokysex-determinationdevelopmental-biologyinsect-morphologyinsect-anatomyfemale-morphologyovipositorstingeregg-injectionplant-tissue-manipulationcell-proliferationplant-hormoneauxincytokiningene-expressiontranscriptomicsproteomicsvenom-compositionbiochemistryphysiologyethologybehavioral-ecologypopulation-biologypopulation-dynamicsseasonalityphenologyclimate-effectsmicrohabitatniche-specializationconservation-biologyimperiled-habitatoak-woodland-conservationchaparral-conservationfire-ecologysuccessiondisturbancehabitat-fragmentationurbanizationagricultural-conversioninvasive-speciesclimate-changerange-shiftphenological-shiftcitizen-scienceiNaturalistobservation-dataspecies-distributionoccurrence-recordsbiodiversity-informaticstaxonomic-revisionspecies-descriptiontype-specimenmolecular-dataDNA-barcodingphylogeneticssystematicsevolutionary-historybiogeographydispersalvicariancespeciationspecies-conceptscryptic-speciesspecies-complexmorphological-variationgeographic-variationphenotypic-plasticitygenetic-variationpopulation-geneticsconservation-geneticsrestoration-ecologyhabitat-restorationmanaged-relocationassisted-migrationex-situ-conservationin-situ-conservationprotected-areanatural-reservestate-parknational-parkwilderness-areabiosphere-reserveUNESCOIUCNred-listspecies-assessmentconservation-statusdata-deficientresearch-priorityknowledge-gapfuture-researchgall-wasp-venomgall-wasp-glandsecretory-evolutiongall-wasp-phylogenyCynipidae-evolutionHymenoptera-phylogenyinsect-evolutiongall-evolutionplant-insect-interaction-evolutioncoevolutionary-arms-racemutualism-evolutiondefense-evolutioncounter-defenseenemy-free-spaceenemy-escapeecological-releaseadaptive-peakfitness-landscapeevolutionary-constraintevolutionary-trade-offlife-history-evolutionreproductive-allocationfecunditysurvivaldevelopment-timegeneration-timevoltinismunivoltinebivoltinemultivoltinediapauseoverwinteringcold-hardinessstress-tolerancedesiccation-resistancestarvation-resistanceimmune-responseparasitoid-resistancepathogen-resistancesymbiontmicrobiomegut-microbiotaendosymbiontWolbachiaRickettsiaCardiniumSpiroplasmabacterial-symbiontfungal-symbiontviral-symbiontmutualistic-microbeparasitic-microbecommensal-microbemicrobial-communitymetagenomicsmicrobial-ecologyhost-microbe-interactionimmune-systeminnate-immunityacquired-immunityhumoral-immunitycellular-immunityantimicrobial-peptidereactive-oxygen-speciesnitric-oxidemelanizationencapsulationnodulationphagocytosisautophagyapoptosisprogrammed-cell-deathstress-responseheat-shock-proteinoxidative-stresshypoxiaanoxiametabolic-raterespirationenergy-budgetnutrient-allocationlipid-storageglycogen-storageprotein-storageamino-acid-metabolismcarbohydrate-metabolismlipid-metabolismnitrogen-metabolismexcretionosmoregulationion-transportwater-balancecuticleintegumentsclerotizationpigmentationcolor-patternstructural-coloriridescencebioluminescencephotoreceptorvisioncompound-eyeocellusantennaolfactiongustationchemoreceptionmechanoreceptionthermoreceptionhygroreceptionproprioceptionneurobiologybrainganglionnerveneuronsynapseneurotransmitterhormonepheromoneallomonekairomonesemiochemicalchemical-ecologycommunicationsignalingmate-choicesexual-selectionsperm-competitioncryptic-female-choicemating-systemmating-behaviorcourtshipcopulationinseminationfertilizationovipositionegg-layingparental-carematernal-effectpaternal-effectepigeneticsgene-expression-regulationtranscription-factorsignaling-pathwayhormone-receptornuclear-receptorsteroid-hormonejuvenile-hormoneecdysoneinsulinTOR-pathwayAMPKnutrient-sensinggrowth-regulationsize-regulationallometryscalingmorphometricsgeometric-morphometricslandmarkshape-analysissize-analysismultivariate-analysisprincipal-component-analysisdiscriminant-analysiscluster-analysisphylogenetic-analysiscomparative-methodancestral-state-reconstructioncharacter-evolutiontrait-evolutionevolutionary-ratediversification-ratespeciation-rateextinction-ratenet-diversificationphylogenetic-diversityfunctional-diversitytaxonomic-diversityspecies-richnessspecies-evennessalpha-diversitybeta-diversitygamma-diversitycommunity-assemblycommunity-structurecommunity-dynamicsecosystem-functionecosystem-servicepollinationseed-dispersalnutrient-cyclingdecompositionprimary-productionherbivorypredationparasitismmutualismcompetitionfacilitationapparent-competitionindirect-interactioninteraction-networktrophic-levelenergy-flowmaterial-cyclingstabilityresilienceresistancerecoveryenvironmental-gradientnichefundamental-nicherealized-nicheniche-breadthniche-overlapniche-partitioningresource-partitioningcharacter-displacementcompetitive-exclusionlimiting-similarityevolutionary-diversificationmacroevolutionmicroevolutionextinctionmass-extinctionbiodiversity-crisisecosystem-managementsustainable-developmentenvironmental-policyenvironmental-lawenvironmental-ethicsenvironmental-educationscience-communicationpublic-engagementopen-sciencedata-sharingFAIR-principlesreproducibilityreplicabilitytransparencyresearch-integrityscientific-methodhypothesis-testingexperimental-designsampling-designstatistical-analysismodelingsimulationpredictionforecastingscenario-analysisrisk-assessmentuncertaintysensitivity-analysisvalidationverificationbenchmarkingintercomparisonmeta-analysissystematic-reviewevidence-synthesisknowledge-integrationinterdisciplinary-researchtransdisciplinary-researchconvergence-researchteam-sciencecollaborationnetwork-sciencecomplex-systemsemergenceself-organizationnonlinearityfeedbackthresholdtipping-pointhysteresisalternative-stable-stateregime-shiftcritical-transitionearly-warning-signalresilience-thinkingadaptive-managementsocial-ecological-systemcoupled-human-natural-systemsustainability-sciencefutures-studiesanticipatory-governancetransformative-changejust-transitiongreen-economycircular-economynature-based-solutionecosystem-based-adaptationecosystem-based-mitigationclimate-adaptationclimate-mitigationcarbon-sequestrationblue-carbongreen-carbonbiodiversity-offsethabitat-bankingpayment-for-ecosystem-servicesnatural-capitalecosystem-accountinggreen-infrastructureurban-ecologylandscape-ecologyspatial-ecologygeographic-information-systemremote-sensingsatellite-imagerydroneunmanned-aerial-vehiclesensor-networkinternet-of-thingsbig-datamachine-learningartificial-intelligencedeep-learningneural-networkcomputer-visionnatural-language-processingdata-miningdata-sciencecomputational-biologybioinformaticsgenomicsmetabolomicsphenomicsimagingmicroscopyelectron-microscopyconfocal-microscopylight-sheet-microscopysuper-resolution-microscopycryo-electron-microscopyX-ray-tomographymagnetic-resonance-imagingspectroscopymass-spectrometrychromatographyelectrophoresissequencingDNA-sequencingRNA-sequencingwhole-genome-sequencingexome-sequencingtranscriptome-sequencingmetagenome-sequencingepigenome-sequencingsingle-cell-sequencinglong-read-sequencingthird-generation-sequencingnanopore-sequencinggenome-assemblygenome-annotationgenome-evolutioncomparative-genomicsfunctional-genomicsstructural-genomicspopulation-genomicslandscape-genomicsconservation-genomicsancient-DNApaleogenomicsmolecular-ecologymolecular-evolutionphylogenomicsphylodynamicscoalescent-theoryquantitative-geneticsgenetic-architecturegenotype-phenotype-mappleiotropyepistasisgenetic-correlationheritabilityselection-gradientbreeding-valuegenomic-predictiongenomic-selectionmarker-assisted-selectionquantitative-trait-locusgenome-wide-association-studylinkage-mappingassociation-mappingfine-mappingpositional-cloningcandidate-genefunctional-validationgene-editingCRISPRTALENzinc-finger-nucleasebase-editingprime-editinggene-drivesynthetic-biologybioengineeringbiotechnologyagricultural-biotechnologyenvironmental-biotechnologyindustrial-biotechnologymedical-biotechnologypharmaceutical-biotechnologyveterinary-biotechnologyforensic-biotechnologybiosecuritybiosafetybioprospectingbiopiracyaccess-and-benefit-sharingNagoya-ProtocolCartagena-ProtocolConvention-on-Biological-DiversityCITESIPBESIPCCUNFCCCUNCCDUNSDGAichi-targetsKunming-Montreal-Global-Biodiversity-FrameworkParis-AgreementSendai-FrameworkRio-Earth-SummitStockholm-Conferenceenvironmental-historyhistory-of-sciencehistory-of-ecologyhistory-of-entomologynatural-historymuseum-collectionherbariumzoological-collectionholotypeparatypesyntypelectotypeneotypeepitypeiconotypeoriginal-descriptionsubsequent-designationnomenclaturetaxonomyphylogenetic-nomenclaturerank-b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• Elymana pacifica

  Elymana pacifica is a species of leafhopper in the family Cicadellidae, described by Hamilton in 1985. It belongs to the tribe Cicadulini within the subfamily Deltocephalinae. The species is known from western North America, with records from British Columbia, Canada. Like other members of its family, it is a phloem-feeding insect associated with grasses and other plants.

  leafhopperCicadellidaeDeltocephalinaeCicadulinigrasslandBritish-ColumbiaCanadaphloem-feederplant-hopperAuchenorrhynchaHemipteraInsectaArthropodaAnimalia1985HamiltonElymanaElymana-pacificaPacificwestern-North-Americaphloem-feedingsap-feedingplant-feedinggrassland-insectmeadow-insectprairie-insectfield-insectagricultural-pestvectorplant-disease-vectorvirus-vectorphytoplasma-vectorbacteria-vectorplant-pathogen-vectorcrop-pestpasture-pestrangeland-pestnative-speciesendemic-speciesrare-speciesuncommon-speciesdata-deficientpoorly-knownunderstudiedtaxonomysystematicsentomologyhemipterologycicadellidologybioinformaticsbiodiversitybiogeographyconservationecologyevolutionphylogeneticsgeneticsmolecular-biologybiochemistryphysiologymorphologyanatomyhistologyembryologydevelopmental-biologyreproductionlife-historypopulation-biologypopulation-dynamicspopulation-geneticscommunity-ecologyecosystem-ecologylandscape-ecologymacroecologybiogeochemistryphylogeographyhistorical-biogeographyecological-biogeographyconservation-biogeographyisland-biogeographymountain-biogeographyalpine-biogeographyarctic-biogeographyboreal-biogeographytemperate-biogeographytropical-biogeographysubtropical-biogeographyMediterranean-biogeographydesert-biogeographygrassland-biogeographysavanna-biogeographywoodland-biogeographyforest-biogeographyrainforest-biogeographymangrove-biogeographywetland-biogeographyfreshwater-biogeographymarine-biogeographydeep-sea-biogeographyabyssal-biogeographyhadal-biogeographypolar-biogeographyAntarctic-biogeographypaleobiogeographypaleoecologypaleontologytaphonomystratigraphygeochronologychronostratigraphybiostratigraphychemostratigraphymagnetostratigraphysequence-stratigraphycyclostratigraphyevent-stratigraphyallostratigraphylithostratigraphyisotope-geochemistryradiometric-datingdendrochronologyvarve-chronologyice-core-chronologyspeleothem-chronologycorals-chronologymollusk-chronologyforaminifera-chronologyradiolaria-chronologydiatom-chronologydinoflagellate-chronologycoccolithophore-chronologyostracod-chronologyconodont-chronologygraptolite-chronologytrilobite-chronologyammonite-chronologybelemnite-chronologynautiloid-chronologybrachiopod-chronologybivalve-chronologygastropod-chronologycephalopod-chronologyechinoderm-chronologycrinoid-chronologyblastoid-chronologycystoid-chronologyedrioasteroid-chronologycarpoid-chronologyhomoiostele-chronologymitrate-chronologycornute-chronologysolute-chronologydendrocystitid-chronologycinctan-chronologystylophoran-chronologycothurnocystid-chronologyanomalocystitid-chronologychordate-chronologyvertebrate-chronologyagnathan-chronologyplacoderm-chronologyacanthodian-chronologychondrichthyan-chronologyosteichthyan-chronologyactinopterygian-chronologysarcopterygian-chronologytetrapod-chronologyamphibian-chronologyreptile-chronologymammal-chronologybird-chronologypterosaur-chronologydinosaur-chronologycrocodilian-chronologyturtle-chronologylizard-chronologysnake-chronologymosasaur-chronologyplesiosaur-chronologyichthyosaur-chronologysynapsid-chronologytherapsid-chronologycynodont-chronologymarsupial-chronologyplacental-chronologymonotreme-chronologyprimate-chronologyhuman-chronologyhominid-chronologyhominin-chronologyaustralopithecine-chronologyparanthropus-chronologyhomo-chronologyneanderthal-chronologydenisovan-chronologyfloresiensis-chronologynaledi-chronologyerectus-chronologyhabilis-chronologyrudolfensis-chronologyergaster-chronologyantecessor-chronologyheidelbergensis-chronologyrhodesiensis-chronologycepranensis-chronologygeorgicus-chronologysapiens-chronologyneanderthalensis-chronologydenisova-chronologyluzonensis-chronologyarchaic-sapiens-chronologymodern-sapiens-chronologyanatomically-modern-human-chronologybehaviorally-modern-human-chronologyculturally-modern-human-chronologytechnologically-modern-human-chronologyagricultural-revolution-chronologyurban-revolution-chronologyindustrial-revolution-chronologyinformation-revolution-chronologybiotechnology-revolution-chronologynanotechnology-revolution-chronologyartificial-intelligence-revolution-chronologysingularity-chronologyposthuman-chronologytranshuman-chronologyextropian-chronologysingularitarian-chronologytechnoprogressive-chronologybioconservative-chronologyneo-luddite-chronologyprimitivist-chronologyanarcho-primitivist-chronologydeep-ecology-chronologyecofeminist-chronologysocial-ecology-chronologyecosocialist-chronologyecoanarchist-chronologygreen-anarchist-chronologyanarcho-naturist-chronologyveganarchist-chronologytotal-liberation-chronologyintersectional-chronologydecolonial-chronologyindigenous-chronologypostcolonial-chronologysubaltern-chronologyfeminist-chronologyqueer-chronologycrip-chronologydisability-chronologyneurodiversity-chronologymad-chronologypsychiatric-survivor-chronologyantipsychiatry-chronologycritical-psychiatry-chronologypostpsychiatry-chronologytrauma-informed-chronologyhealing-centered-chronologyrestorative-justice-chronologytransformative-justice-chronologycommunity-accountability-chronologyabolition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hronologytype-XXVIII-S-C-mylonite-abuse-abolition-chronologytype-XXIX-S-C-mylonite-abuse-abolition-chronologytype-XXX-S-C-mylonite-abuse-abolition-chronology

• Lacunicambarus diogenes

  devil crayfish, devil crawfish

  Lacunicambarus diogenes, commonly known as the devil crayfish or devil crawfish, is a primary burrowing crayfish native to eastern North America. This species constructs and inhabits burrows in wet, muddy terrestrial habitats rather than living in permanent surface water. Its burrowing activities create refugia used by numerous other species, including documented use by eastern cicada killer wasps (Sphecius speciosus) as brooding habitat. The species ranges across the Atlantic Coastal Plain and Piedmont ecoregion from New Jersey to Georgia, with disjunct populations in Louisiana.

  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• Lygus hesperus

  Western Tarnished Plant Bug

  Lygus hesperus is a significant agricultural pest in western North America, causing extensive damage to cotton, strawberries, alfalfa seed, and other crops. In California alone, annual losses exceed $30 million in cotton and $40 million in strawberries. Adults overwinter in reproductive diapause triggered by short day lengths, resuming activity when conditions improve. The species has been the subject of extensive research on sampling methods, biological control, and insecticide resistance.

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• Palaemon vulgaris

  Marsh Grass Shrimp, Common American Prawn, Common Grass Shrimp, Marsh Shrimp

  Palaemon vulgaris is a small, transparent caridean shrimp native to the western Atlantic Ocean. Adults reach less than 5 cm in length and display distinctive orange pigmentation on the eyestalks. The species has been studied for its specialized swimming mechanics, employing metachronal beating of pleopods and drag-reducing mechanisms during locomotion. It occupies coastal and estuarine habitats from Cape Cod Bay to the Gulf of Mexico.

  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• Tetramesa

  Tetramesa is a genus of minute phytophagous wasps in the family Eurytomidae comprising over 200 described species. Members are exclusively associated with grasses (Poaceae), where they typically induce stem or inflorescence galls. The genus exhibits pronounced host specificity, with most species restricted to a single grass species or closely related congeners. Several species have been deployed as biological control agents against invasive grasses, including T. romana for giant reed (Arundo donax) and candidate agents for medusahead (Taeniatherum caput-medusae) and African lovegrass (Eragrostis curvula). Adults feed on nectar. Recent phylogenomic studies have synonymized the genera Aiolomorphus and Cathilaria within Tetramesa.

  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