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Ixodes affinis
Ixodes affinis is a hard-bodied tick species distributed across the southeastern United States, Mexico, Central America, and South America. Unlike its congener Ixodes scapularis, this species does not bite humans but serves as a competent vector for Borrelia burgdorferi sensu stricto, the causative agent of Lyme disease. Immature stages feed on birds and small mammals, while adults parasitize larger mammals including deer and dogs. Its expanding range into southeastern Virginia and association with migratory birds has raised concerns about its role in pathogen dispersal.
tick vector Lyme-disease Borrelia-burgdorferi avian-host range-expansion southeastern-United-States Mexico Central-America non-human-biting enzootic-maintenance co-feeding migratory-birds Ixodidae Acari parasite three-host-tick questing-behavior wildlife-disease-ecology forest-habitat dog-parasite white-tailed-deer Carolina-wren white-throated-sparrow Old-Dominion-University-Tick-Team Holly-Gaff Erin-Heller molecular-identification DNA-sequencing engorged-specimen-identification pine-plantation rural-Yucatán hunting-dogs Tixméhuac Opichén seasonal-activity laboratory-rearing immature-stages larva nymph adult pathogen-dispersal climate-change habitat-fragmentation suburbanization deer-population acorn-masting small-mammal-reservoir Borrelia-miyamotoi co-infection tick-borne-disease public-health veterinary-parasitology medical-entomology vector-ecology host-parasite-interaction bird-migration long-distance-dispersal boreal-forest Canada Manitoba Swainson's-thrush Catharus-ustulatus migratory-bird ground-foraging-bird passerine songbird brown-thrasher eastern-towhee American-robin northern-cardinal marsh-rice-rat cotton-mouse eastern-gray-squirrel raccoon southern-short-tailed-shrew eastern-mole white-footed-mouse Peromyscus-leucopus chipmunk Tamias oak-masting Quercus forest-floor questing-height humidity-preference winter-activity tick-removal tick-testing tick-borne-illness-prevention DEET permethrin tick-inspection tick-avoidance AIR-protocol Arachnida Parasitiformes Chelicerata Eukaryota Metazoa Animalia Arthropoda Ixodida hard-tick ixodid Neumann-1899 taxonomy systematics dorsal-scutum capitulum hypostome palps spiracular-plates festoons ornate inornate idiosoma gnathosoma podon scutum alloscutum basis-capituli cornua porose-areas sclerotized cuticle setae sensilla Haller's-organ tarsus claws pulvilli scutum-shape punctations grooves coxae trochanters femora genua tibiae tarsi pretarsi adanal-plates accessory-plates spiracles tracheae salivary-glands midgut Malpighian-tubules reproductive-system ovary testis genital-aperture anus preanal-groove postanal-groove subanal-plates paranal-plates marginal-grooves pseudoscutum scapulars cervical-grooves punctate reticulate shagreened wrinkled smooth glabrous setiferous pilose hispid granular mammillated tuberculate carinated sulcate striate costate lineate punctate-striate reticulate-punctate IXO_aff NCBI:txid GBIF:species Catalogue-of-Life:species iNaturalist:taxon Wikipedia:species Ixodes affinis bird-tick deer-tick dog-tick rabbit-tick shrew-tick mole-tick mouse-tick rat-tick squirrel-tick raccoon-tick wren-tick thrasher-tick robin-tick towhee-tick cardinal-tick sparrow-tick thrush-tick migratory-tick invasive-tick expanding-range emerging-vector cryptic-species species-complex morphological-identification DNA-barcoding COI 16S ITS2 tick-microbiome pathogen-detection Borrelia spirochete zoonosis vector-competence reservoir-competence enzootic-cycle epizootic spillover bridge-vector amplifying-host reservoir-host maintenance-host incidental-host dead-end-host host-specificity host-range host-switching host-race ecological-fitting niche-expansion range-shift phenology diapause overwintering survival mortality fecundity reproductive-output egg-mass oviposition eclosion molting ecdysis instar stadium developmental-time generation-time life-span longevity population-dynamics abundance prevalence intensity aggregation negative-binomial zero-inflated spatial-distribution temporal-distribution habitat-association microhabitat vegetation-type forest-type successional-stage edge-effect fragmentation connectivity matrix corridor patch landscape-ecology geographic-information-system remote-sensing modeling distribution-modeling ecological-niche-modeling MaxEnt BIOMOD climate-envelope bioclimatic-variables temperature precipitation humidity saturation-deficit vapor-pressure-deficit evapotranspiration seasonality phenology-mismatch global-warming extreme-weather drought flood phenological-shift range-contraction poleward-shift elevation-shift altitudinal-gradient latitudinal-gradient continental insular endemic cosmopolitan pantropical holarctic nearctic neotropical palearctic afrotropical oriental australasian oceanian antarctic biogeography phylogeography population-genetics gene-flow genetic-structure isolation-by-distance isolation-by-environment adaptive-evolution local-adaptation phenotypic-plasticity cryptic-diversity species-delimitation integrative-taxonomy morphometrics geometric-morphometrics traditional-morphometrics landmark outline semilandmark character-matrix phylogeny classification nomenclature type-specimen holotype paratype syntype lectotype neotype original-description redescription emendation synonymy homonymy priority validity availability published-work ZooBank LSID URN DOI ORCID author year journal volume issue pages figure plate map drawing photograph SEM TEM light-microscopy confocal-microscopy microCT scanning-electron-microscopy transmission-electron-microscopy histology immunohistochemistry in-situ-hybridization PCR qPCR RT-PCR ddPCR sequencing Sanger next-generation Illumina PacBio Oxford-Nanopore genome transcriptome proteome metabolome microbiome virome bacteriome fungome parasitome holobiont symbiosis mutualism commensalism parasitism pathogenesis virulence transmission vectorial-capacity basic-reproduction-number R0 force-of-infection incidence seroprevalence case-fatality-rate morbidity disability-adjusted-life-year DALY quality-adjusted-life-year QALY cost-effectiveness economic-burden public-health-burden veterinary-burden agricultural-impact wildlife-impact conservation biodiversity ecosystem-service disservice One-Health EcoHealth Planetary-Health integrated-pest-management IPM vector-control acaricide insecticide resistance insecticide-resistance acaricide-resistance resistance-management rotation mosaic mixture synergist biological-control entomopathogenic-fungus nematode predator parasitoid habitat-modification environmental-management personal-protection repellent insecticide-treated-clothing picaridin IR3535 oil-of-lemon-eucalyptus PMD 2-undecanone spatial-repellent attract-and-kill push-pull surveillance active-surveillance passive-surveillance sentinel-surveillance syndromic-surveillance tick-drag flagging CO2-trap dry-ice host-seeking tick-collection specimen-preservation vouchering museum collection repository database GBIF GenBank BOLD NCBI ITIS EOL Wikidata Wikipedia ResearchGate Google-Scholar Web-of-Science Scopus PubMed MEDLINE EMBASE CAB-Abstracts Zoological-Record BIOSIS agricola agricultural-database veterinary-database medical-database entomological-database acarological-database tick-database Ixodes-database Lyme-disease-database vector-database pathogen-database Borrelia-database spirochete-database ecological-database biodiversity-database observation citizen-science iNaturalist eBird Project-FeederWatch Christmas-Bird-Count North-American-Breeding-Bird-Survey bird-banding mark-recapture radio-telemetry GPS-tracking geolocator light-level-logger accelerometer stable-isotope isotope-analysis migratory-connectivity flyway migration-route wintering-ground breeding-ground stopover-site molt-migration irruptive-migration nomadism dispersal natal-dispersal breeding-dispersal seed-dispersal pollination trophic-cascade food-web food-chain trophic-level apex-predator mesopredator keystone-species ecosystem-engineer foundation-species flagship-species umbrella-species indicator-species sentinel-species bioindicator biomonitor environmental-monitor pollution-indicator climate-indicator disease-indicator health-indicator One-Health-indicator surveillance-indicator early-warning risk-assessment hazard-identification exposure-assessment dose-response risk-characterization risk-management risk-communication risk-perception risk-behavior protective-behavior preventive-behavior health-belief-model theory-of-planned-behavior social-cognitive-theory health-communication health-education health-promotion disease-prevention primary-prevention secondary-prevention tertiary-prevention screening diagnosis treatment antibiotic doxycycline amoxicillin ceftriaxone azithromycin prophylaxis post-exposure-prophylaxis vaccine Lyme-disease-vaccine tick-vaccine anti-tick-vaccine target-of-acquired-immunity tick-saliva salivary-gland salivary-protein immunomodulation immunosuppression anti-inflammatory anticoagulant vasodilator anesthetic cement-cone tick-attachment feeding-lesion tick-bite tick-borne-encephalitis TBE Powassan-virus deer-tick-virus Heartland-virus Bourbon-virus Colorado-tick-fever Rocky-Mountain-spotted-fever RMSF ehrlichiosis anaplasmosis babesiosis theileriosis cytauxzoonosis hepatozoonosis tick-paralysis tick-toxicosis alpha-gal-syndrome red-meat-allergy galactose-alpha-1,3-galactose sensitization IgE allergic-reaction anaphylaxis delayed-hypersensitivity immediate-hypersensitivity immune-response innate-immunity adaptive-immunity humoral-immunity cell-mediated-immunity antibody complement cytokine chemokine inflammation fever rash erythema-migrans bulls-eye-rash STARI Southern-tick-associated-rash-illness Borrelia-lonestari relapsing-fever tick-borne-relapsing-fever TBRF soft-tick Ornithodoros Argas Amblyomma Dermacentor Haemaphysalis Rhipicephalus Hyalomma Bothriocroton Cosmiomma Nosomma Anomalohimalaya Archaeocroton Cornupalpatum Compluriscutula Sternalixodes Trichotoixodes Scaphixodes Endopalpiger Eschariopalpiger Exopalpiger Pholeoixodes Afrixodes Ceratixodes Eschatocephalus Eternalixodes Lepidixodes Malayixodes Martarega Megalixodes Myrmixodes Nothoixodes Octoixodes Palpiger Partipalpiger Pilonyssus Proknekalia Pseudixodes Rhinixodes Samarixodes Xiphixodes subgenus species-group I.-ricinus-complex I.-persulcatus-complex I.-scapularis-complex I.-pacificus-complex I.-affinis-group I.-cookei-group I.-marxi-group I.-angustus-group I.-soricis-group I.-uriae-group I.-holocyclus-group I.-ceylonensis-group I.-granulatus-group I.-ovatus-group I.-nipponensis-group I.-persulcatus-group I.-pavlovskyi-group I.-ricinus-group I.-scapularis-group I.-pacificus-group I.-affinis I.-auritulus I.-australiensis I.-boliviensis I.-brunneus I.-cookei I.-cooleyi I.-cornuae I.-cornuatus I.-crenulatus I.-dammini I.-dawsoni I.-dentatus I.-diomedeae I.-domerguei I.-eadsi I.-eastoni I.-eldaricus I.-elongatus I.-eudyptidis I.-euplectropi I.-evansi I.-fecialis I.-festai I.-frontalis I.-galapagoensis I.-ghilarovi I.-gibbosus I.-granulatus I.-gregsoni I.-hearlei I.-hexagonus I.-hirsti I.-holocyclus I.-hoogstraali I.-howelli I.-hyatti I.-jacksoni I.-jellisoni I.-kashmiricus I.-kazakstani I.-kingi I.-kohlsi I.-kopsteini I.-kuntzi I.-laguri I.-latus I.-layingensis I.-lewisi I.-lividus I.-longiscutatus I.-loricatus I.-luciae I.-malayensis I.-marxi I.-maslovi I.-matopi I.-minor I.-monospinosus I.-moreli I.-moschiferi I.-muris I.-murreleti I.-myospalacis I.-nchisiensis I.-necromys I.-neitzi I.-nipponensis I.-nuttalli I.-ochotonae I.-okapiae I.-oldi I.-ornithorhynchi I.-ovatus I.-pacificus I.-pararicinus I.-pavlovskyi I.-percavatus I.-peromysci I.-persulcatus I.-pomerantzi I.-pterodromae I.-quadratus I.-raccoonis I.-rageaui I.-randrianasoloi I.-rasus I.-redikorzevi I.-ricinus I.-rothschildi I.-rotundatus I.-rubicundus I.-rugicollis I.-rugosus I.-sapeloensis I.-sarsi I.-scapularis I.-schillingsi I.-sculptus I.-semenovi I.-soricis I.-spinae I.-steini I.-stilesi I.-stromi I.-subterranus I.-tancitarius I.-tanuki I.-tapirus I.-tasmani I.-taylori I.-tertiarius I.-texanus I.-theilerae I.-thomasae I.-tovari I.-transvaalensis I.-trianguliceps I.-trichosuri I.-turdus I.-uriae I.-vandenbergi I.-vanidicus I.-ventalloi I.-vespertilionis I.-victoriensis I.-walkerae I.-werneri I.-woodi I.-zaglossi I.-zairensis tick-taxonomy tick-systematics tick-phylogeny tick-evolution tick-biogeography tick-ecology tick-physiology tick-behavior tick-reproduction tick-development tick-nutrition tick-metabolism tick-respiration tick-excretion tick-osmoregulation tick-neurobiology tick-sensory-biology tick-chemoreception tick-thermoreception tick-mechanoreception tick-photoreception tick-circadian-rhythm tick-biological-clock tick-seasonality tick-diapause tick-overwintering tick-cold-hardiness tick-desiccation-resistance tick-water-balance tick-cuticle tick-molting tick-ecdysis tick-growth tick-feeding tick-engorgement tick-blood-meal tick-digestion tick-salivation tick-saliva-composition tick-salivary-gland-transcriptome tick-salivary-proteome tick-pharmacology tick-toxicology tick-venom tick-paralysis-toxin tick-borne-pathogen tick-borne-virus tick-borne-bacterium tick-borne-protozoan tick-borne-helminth tick-borne-rickettsia tick-borne-ehrlichia tick-borne-anaplasma tick-borne-borrelia tick-borne-babesia tick-borne-theileria tick-borne-hepatozoon tick-borne-coxiella tick-borne-francisella tick-borne-bartonella tick-borne-chlamydia tick-borne-mycoplasma tick-borne-spiroplasma tick-borne-arbovirus tick-borne-flavivirus tick-borne-bunyavirus tick-borne-reovirus tick-borne-orbivirus tick-borne-coltivirus tick-borne-nairovirus tick-borne-phlebovirus tick-borne-thogotovirus tick-borne-orthomyxovirus tick-borne-arenavirus tick-borne-hantavirus tick-borne-paramyxovirus tick-borne-rhabdovirus tick-borne-bornavirus tick-borne-filovirus tick-borne-coronavirus tick-borne-poxvirus tick-borne-herpesvirus tick-borne-adenovirus tick-borne-papillomavirus tick-borne-polyomavirus tick-borne-circovirus tick-borne-parvovirus tick-borne-anellovirus tick-borne-dependovirus tick-borne-tenuivirus tick-borne-deltavirus tick-borne-hepadnavirus tick-borne-retrovirus tick-borne-lentivirus tick-borne-spumavirus tick-borne-metavirus tick-borne-pseudovirus tick-borne-hemivirus tick-borne-novirhabdovirus tick-borne-peribunyavirus tick-borne-phenuivirus tick-borne-bandavirus tick-borne-phasivirus tick-borne-tulasvirus tick-borne-orthonairovirus tick-borne-shavivirus tick-borne-sathuperi-virus tick-borne-salehabad-virus tick-borne-dera-ghazi-khan-virus tick-borne-hughes-virus tick-borne-farallon-virus tick-borne-punta-salinas-virus tick-borne-sapphire-II-virus tick-borne-zirqa-virus tick-borne-keterah-virus tick-borne-thiafora-virus tick-borne-erve-virus tick-borne-malsoor-virus tick-borne-tibet-virus tick-borne-qalyub-virus tick-borne-yogue-virus tick-borne-kasokero-virus tick-borne-lebombo-virus tick-borne-nyamanini-virus tick-borne-midway-virus tick-borne-tokar-virus tick-borne-absettarov-virus tick-borne-hypr-virus tick-borne-kumlinge-virus tick-borne-omsk-hemorrhagic-fever-virus tick-borne-langat-virus tick-borne-louping-ill-virus tick-borne-kyasanur-forest-disease-virus tick-borne-alkhurma-hemorrhagic-fever-virus tick-borne-powassan-virus tick-borne-deer-tick-virus tick-borne-heartland-virus tick-borne-bourbon-virus tick-borne-colorado-tick-fever-virus tick-borne-eyach-virus tick-borne-banna-virus tick-borne-seadornavirus tick-borne-great-island-virus tick-borne-kemerovo-virus tick-borne-lipovnik-virus tick-borne-tribec-virus tick-borne-chobar-gorge-virus tick-borne-wad-Medani-virus tick-borne-dugbe-virus tick-borne-crimean-congo-hemorrhagic-fever-virus tick-borne-nairobi-sheep-disease-virus tick-borne-ganjam-virus tick-borne-bandia-virus tick-borne-sierra-nevada-virus tick-borne-lone-star-virus tick-borne-severe-fever-with-thrombocytopenia-syndrome-virus tick-borne-huaiyangshan-virus tick-borne-guertu-virus tick-borne-Alongshan-virus tick-borne-wenzhou-virus tick-borne-wuhan-virus tick-borne-yongjia-virus tick-borne-chiba-virus tick-borne-natori-virus tick-borne-odawara-virus tick-borne-kowloon-virus tick-borne-tamanavirus
Pentodontini
rhinoceros beetles
Pentodontini is the most diverse tribe within the subfamily Dynastinae (rhinoceros beetles), containing over 100 genera distributed across multiple biogeographic regions. Most genera are restricted to a single biogeographic region. The tribe is characterized by substantial morphological diversity, with generic-level identification often relying on mouthpart morphology in females and secondary sexual characters (horns, claw modifications, antennal club length) in males.
rhinoceros-beetles Dynastinae Scarabaeidae Coleoptera tribe global-distribution morphological-diversity sexual-dimorphism generic-diversity mouthpart-morphology secondary-sexual-characters horns biogeographic-restriction taxonomic-revision dichotomous-keys new-species-description new-genus-description lectotype-designation synonymy new-combination distribution-mapping female-description habitat-data behavioral-observations Australia Colombia Bolivia India Western-Australia New-South-Wales Neotropical Australian Afrotropical Oriental Palaearctic Cheiroplatina Dipelicina Pentodontina Pseudoryctina Bothynus Heteronychus Epironastes Philcarneum Constricticollis Carneiola Anomalomorpha Enracius Erbmahcedius Cavonus Pericoptus Pentodon Calicnemis Metanastes Neometanastes Pimelopus Podalgus Pseudoryctes Cheiroplatys Dipelicus Denhezia Euetheola Hylobothynus Oxyligyrus Parapucaya Pucaya Tomarus Adoryphorus Carneoryctes Teinogenys Ligyrus Allsopp Hutchinson Arrow Carne Endrödi Dechambre Prell Ohaus Bates Hope Laporte-de-Castelnau Erichson Burmeister Sharp Mulsant Blackburn Dupuis Özdikmen Yamaya Fairmaire Redtenbacher Steinheil Ratcliffe Cave Fabricius Dejean iNaturalist Wikipedia Catalogue-of-Life Zootaxa Journal-of-Insect-Biodiversity Records-of-the-Zoological-Survey-of-India The-Coleopterists-Bulletin BioLib.cz Wikimedia-Commons DOI 10.11646/zootaxa.4048.4.1 10.11646/zootaxa.4852.4.2 10.11646/zootaxa.5351.3.2 10.26515/rzsi/v125/i2s/2025/172964 10.11646/zootaxa.5716.4.7 10.11646/zootaxa.5072.5.2 10.11646/zootaxa.4852.4.3 10.12976/jib/2024.54.2.2 10.1649/1186.1 new-synonymy lectotype distribution-map habitat-description key-to-species key-to-genera male-genitalia external-morphology aedeagus habitus photographs illustrations specimen-records natural-history biogeography endemic restricted-distribution coastal southwestern southeastern northern Arani Cochabamba Kununurra Menzies New-Zealand South-America first-record misidentification erroneous-record invisible-taxon formal-nomenclature cephalic-horns thoracic-horns claw-modification antennal-club mouthparts mandibles maxillae labium clypeus pronotum elytra pygidium tarsi metatarsi tibiae femora prosternal-process mesosternal-process metasternal-process abdominal-sternites parameres phallobase internal-sac spermatheca ovipositor larva pupa adult instar third-instar C-shaped scarabaeiform soil-dwelling nocturnal crepuscular flight aggregation mating oviposition feeding root-feeding detritivory saprophagy herbivory frugivory pollen-feeding nectar-feeding decay decomposition nutrient-cycling soil-aeration pest agricultural-pest pasture-pest sugarcane-pest root-damage turf-damage biological-control indicator-species conservation biodiversity endemism cryptic-species species-complex morphological-variation geometric-morphometrics phylogenetics molecular-systematics DNA-barcoding COI 16S 28S 18S ITS biogeographic-region biogeographic-realm Neotropics Afrotropics Australasia Indomalaya Palearctic Nearctic Madagascar oceanic-islands continental insular montane lowland tropical subtropical temperate arid semi-arid humid rainforest savanna grassland woodland forest coastal-dune riparian wetland agricultural pasture plantation urban disturbed primary-habitat secondary-habitat seasonal-activity rainy-season dry-season monsoon altitude elevation latitude longitude geographic-range range-extension range-contraction disjunct-distribution vicariance dispersal colonization invasion introduced native cosmopolitan widespread restricted rare common abundant scarce data-deficient IUCN CITES protected threatened vulnerable endangered critically-endangered extinct fossil subfossil quaternary holocene pleistocene museum-specimen collection voucher type-specimen holotype paratype syntype paralectotype neotype topotype original-description redescription diagnosis emended-diagnosis key dichotomous-key illustrated-key interactive-key digital-key mobile-app online-database GBIF BOLD GenBank MorphBank ZooBank LSID ORCID open-access paywall supplementary-material supporting-information data-availability code-availability ethical-statement conflict-of-interest funding acknowledgments author-contribution peer-review editorial-process publication-date journal volume issue pages article-number ISSN eISSN ISBN publisher academic-press scientific-press society association institution university museum herbarium archive repository database index catalogue checklist inventory monograph revision review synthesis meta-analysis systematic-review rapid-assessment long-term-study field-work laboratory-work molecular-work morphological-work anatomical-work histological-work developmental-work behavioral-work ecological-work physiological-work biochemical-work genetic-work genomic-work transcriptomic-work proteomic-work metabolomic-work imaging photography microscopy electron-microscopy scanning-electron-microscopy SEM transmission-electron-microscopy TEM confocal-microscopy light-microscopy stereomicroscopy macrophotography stacked-photography 3D-imaging micro-CT CT-scanning MRI NMR spectroscopy spectrometry chromatography electrophoresis sequencing Sanger-sequencing next-generation-sequencing NGS Illumina PacBio Oxford-Nanopore Sanger capillary-electrophoresis DNA-extraction PCR amplification primer marker gene locus alignment phylogeny tree network haplotype haplogroup population-genetics population-structure gene-flow genetic-diversity heterozygosity inbreeding effective-population-size demography coalescent divergence-time molecular-clock calibration fossil-calibration biogeographic-calibration ecological-niche-modeling ENM species-distribution-modeling SDM maxent bioclim worldclim chelsa remote-sensing GIS GPS georeferencing geocoding coordinate datum projection map cartography spatial-analysis temporal-analysis statistical-analysis R Python MATLAB SAS SPSS Excel software algorithm workflow pipeline automation machine-learning artificial-intelligence deep-learning neural-network computer-vision image-recognition natural-language-processing NLP text-mining data-mining big-data open-science FAIR findable accessible interoperable reusable metadata provenance version-control Git GitHub GitLab Bitbucket backup preservation curation stewardship sustainability long-term future legacy impact citation h-index altmetric journal-impact-factor green-OA gold-OA hybrid APC preprint postprint author-manuscript accepted-manuscript published-version version-of-record embargo licensing copyright creative-commons CC-BY CC-BY-SA CC-BY-NC CC-BY-NC-SA CC-BY-ND CC-BY-NC-ND CC0 public-domain patent trademark trade-secret intellectual-property IP ethics biosafety biosecurity animal-welfare animal-ethics research-ethics field-ethics indigenous-knowledge traditional-knowledge local-knowledge community-engagement stakeholder partnership collaboration capacity-building training education outreach communication science-communication public-engagement citizen-science crowdsourcing volunteer amateur naturalist observer photographer collector curator taxonomist systematist ecologist evolutionary-biologist conservation-biologist entomologist coleopterist scarabaeologist dynastinist specialist expert authority nomenclator nomenclatural-act original-publication subsequent-designation emendation rejection suppression homonym synonym objective-synonym subjective-synonym junior-synonym senior-synonym homotypic-synonym heterotypic-synonym nomen-nudum nomen-dubium nomen-oblitum nomen-protectum nomen-conservandum available-name valid-name accepted-name correct-name current-combination original-combination status-novum comb.-nov.syn.-nov.sp.-nov.gen.-nov.subgen.-nov.subsp.-nov.nom.-nov.nom.-nud.nom.-dub.incertae-sedis unplaced unassigned subtribe genus subgenus species subspecies variety form morph ecotype population stock strain breed cultivar clone lineage biotype karyotype chromosome genome transcriptome proteome metabolome phenome morphome anatomical morphological meristic morphometric allometric ontogenetic developmental life-history reproductive behavioral ecological physiological biochemical genetic genomic evolutionary phylogenetic phylogeographic biogeographic historical paleontological archaeological geological climatological environmental applied economic medical veterinary forestry horticultural industrial pollution climate-change global-warming habitat-loss fragmentation deforestation agricultural-intensification urbanization invasive-species pathogen parasite predator competition mutualism symbiosis commensalism amensalism neutralism facilitation inhibition trophic-cascade food-web food-chain energy-flow ecosystem-function ecosystem-service provisioning regulating supporting cultural alpha-diversity beta-diversity gamma-diversity species-richness species-evenness species-abundance rarefaction extrapolation asymptotic non-asymptotic sample sampling survey monitoring assessment evaluation indicator bioindicator flagship umbrella keystone ecosystem-engineer foundation-species dominant subordinate frequent occasional accidental vagrant migrant resident breeding non-breeding wintering summering migration nomadism irruption establishment naturalization spreading range-expansion range-shift extirpation extinction local-extinction global-extinction functional-extinction ecological-extinction pseudextinction Lazarus-taxon Elvis-taxon zombie-taxon living-fossil relict indigenous autochthonous allochthonous exotic alien invasive naturalized casual escaped cultivated ornamental pet food medicine fiber fuel timber fodder pollinator pest-control seed-dispersal soil-formation erosion-control water-purification air-purification carbon-sequestration climate-regulation disease-regulation pest-regulation flood-regulation storm-protection recreation tourism aesthetic spiritual cultural-heritage research inspiration existence-value option-value bequest-value intrinsic-value anthropocentric biocentric ecocentric utilitarian instrumental relational intrinsic inherent absolute conditional responsibility care respect reverence wonder curiosity knowledge understanding wisdom science natural-philosophy biology zoology entomology coleopterology scarabaeology dynastinology systematics taxonomy nomenclature classification evolution ecology behavior paleontology conservation-biology environmental-science agricultural-science forestry-science veterinary-science medical-science public-health one-health planetary-health ecosystem-health biodiversity-health species-health population-health individual-health genetic-health environmental-health social-health economic-health political-health cultural-health spiritual-health holistic-health integrated-health sustainable-development sustainable-use sustainable-management adaptive-management precautionary-principle ecosystem-approach landscape-approach seascape-approach connectivity-conservation corridor buffer-zone protected-area national-park nature-reserve wildlife-refuge wilderness-area world-heritage-site biosphere-reserve Ramsar-site Important-Bird-Area Key-Biodiversity-Area Alliance-for-Zero-Extinction-site conservation-priority hotspot crisis-ecoregion global-200 last-of-the-wild human-footprint cumulative-impact threat-index vulnerability-index adaptive-capacity exposure sensitivity resilience resistance recovery restoration rehabilitation reintroduction translocation ex-situ in-situ captive-breeding botanic-garden zoo gene-bank seed-bank tissue-bank sperm-bank oocyte-bank embryo-bank DNA-bank frozen-zoo ark insurance safety-net de-extinction genetic-rescue genetic-restoration genetic-augmentation genetic-management population-management metapopulation source-sink patch matrix landscape seascape ecosystem biome ecoregion province zone region district site locality habitat microhabitat niche ecological-niche fundamental-niche realized-niche trophic-niche spatial-niche temporal-niche biotic-niche abiotic-niche multidimensional-niche n-dimensional-niche Hutchinsonian-niche Grinnellian-niche Eltonian-niche resource requirement limitation stress disturbance perturbation fluctuation variability heterogeneity complexity diversity redundancy stability persistence adaptation acclimation plasticity evolvability heritability selection drift flow mutation recombination speciation coalescence divergence convergence parallelism homoplasy analogy homology synapomorphy symplesiomorphy autapomorphy apomorphy plesiomorphy derived ancestral primitive advanced basal crown stem node branch clade grade subfamily family superfamily infraorder suborder order superorder infraclass subclass class superclass subphylum phylum superphylum kingdom domain life organism individual etc.
Plectrocnemia
tube maker caddisflies
Plectrocnemia is a genus of tube maker caddisflies in the family Polycentropodidae comprising more than 120 described species. Larvae are aquatic predators that construct silken capture nets to intercept prey. The genus has been extensively studied for its larval silk production, vibration-mediated predatory behavior, and population genetics. Species occur across Europe and into western Asia, with detailed biological information available for several well-studied species including P. conspersa and P. brevis.
Trichoptera caddisfly aquatic-insect predator silk bioindicator net-spinner vibration-detection population-genetics Europe running-water larvae Plectrocnemia-conspersa Plectrocnemia-brevis Plectrocnemia-renetta Plectrocnemia-latissima genome silk-fibroin kin-structure dispersal egg-mass colonial-net oxygen-requirements Caucasus Britain Greece Turkey Cyprus Vermont freshwater stream river spring predatory-behavior vibration-frequency setae-morphology larval-identification-key Oxford-Nanopore-sequencing BUSCO-completeness L-chain-fibroin neighborhood-population-size patchy-recruitment-hypothesis genetic-relatedness microsatellite oviposition hot-spots first-instar pupation mandible-capture orientation-behavior building-behavior prey-capture Chironomidae Oligochaeta substrate-borne-vibration silken-tube tube-maker Polycentropodidae Stephens-1836 more-than-120-species genome-assembly nutrient-cycling ecosystem-services industrial-interest phylogenomics comparative-genomics genome-size contiguity polishing Illumina Nanopore draft-genome annotated-genome Hydropsyche-tenuis spatial-genetic-structure colonization gene-flow genetic-drift dispersal-distance flight temporary-populations permanent-populations habitat-patches suitable-habitat ecological-niche case-making-behavior larval-case silk-secretion protein-component genomic-region gene-cluster genomic-resources high-quality-genome shortest-genome variable-quality published-genomes insect-order speciose industrial-application biomaterial natural-material biomimicry conservation water-quality-monitoring environmental-indicator clean-water oxygen-concentration northern-slopes Central-Caucasus rivers-and-streams biology aspects-of-biology reported inhabits final-instar diagnostic-features illustrated discriminatory-matrix Greek-species zoogeography reported-from key-to-larvae revised-key notes-on previously-unknown-larva distinguishes other-British-species larval-habitat adult-identification genetic-differentiation sites population-sizes short-range-trend greater-distances evolutionary-processes small-scales number-of-generations found-small-populations grow-and-exchange-genes larger-scales substantial-gaps regions colonisation-events genetic-patterns last-colonised ecological-studies dynamics persistence-and-spread central-to Martynov-1913 Malicky-1975 Curtis-1834 McLachlan Curtis Navas genus-Stephens-1836 family-Polycentropodidae order-Trichoptera class-Insecta phylum-Arthropoda kingdom-Animalia Eukaryota Hexapoda Hydropsychoidea Polycentropodinae iNaturalist GBIF Catalogue-of-Life NCBI-Taxonomy Wikipedia Zeitschrift-für-Tierpsychologie Freshwater-Biology Zootaxa Genome-Biology-and-Evolution Zoosymposia DOI abstract paper-summary evidence confidence-notes observations-count matched-scientific-name canonical-name rank status accepted match-type higherrank distribution-records genus-of-tube-maker-caddisflies more-than-120-described-species list-of-species references further-reading external-links title journal subjects Zusammenfassung Die-Larven-von leben-in-Fließwässern fängt-mit-einem-Netz-Beute hauptsächlich-Chironomiden-Larven-und-Oligochaeten Wirkung-der-von-der-Beute-im-Netz-erzeugten-Vibrationen Aufmerksamkeit Orientierung-und-Bewegung Fangversuche um-so-schneller verwirrt Baubewegungen Bauverhalten Beutefang enger-Verbindung recruitment kin southern-English-stream objectives small-scale-patterns stream-dwelling spatial-proximity-of-close-kin patchy-recruitment distribution-of-related-larvae aquatic-phase egg-masses spatially-and-temporally-structured-samples field-collected-larvae six-polymorphic-microsatellite-loci siblings progeny-of-one-father background-population-level siblings-disperse changes-in-spatial-genetic-structure neighbouring-larvae avoiding-kin onset-of-pupation survival-through-the-egg-stage first-instar-larvae number-of-egg-masses refute larva-of including larvae-of species-of-Greece morphology final-instar-larva inner-and-outer-dorsal-secondary-setae abdominal-segment-IX muscle-attachment-spots head-capsule abdominal-sternum-IX distribution-patterns annotated-draft-genomes larval-silk-secretions diverse-case-making-behavior ecological-niches five-genomes low-cost-sequencing-strategy Oxford-Nanopore-flow-cell Illumina-sequence-reads high-quality-genomes de-novo-assembly-methods low-coverage-Nanopore-reads shortest-genomes light-L-chain-fibroin L-fibroin-gene-clusters phylogenomic comparative-genomic larvae-of-the-genus other-two-British life-cycle adult genetic-population-structure neighbourhood-population-size-estimates role-of-history scale-of-colonisation structuring-populations genetic-and-ecological-methods no-genetic-differentiation up-to-20-km despite-population-sizes greater-than-expected contrasting-short-range-trend implausibly-small relatively-short-flights winged-adults found-small often-temporary larger-and-more-permanent amplifying regions-containing reduce date-from rarely-examined central biology-of springs high-oxygen-concentration good-indicator water-quality tube-maker-caddisflies genus observations taxonomy-match matched canonical classification Animalia Arthropoda Insecta group caddisflies Metazoa genus-Plectrocnemia list-of-Plectrocnemia-species vibrations-and-predatory-behaviour effects-of-vibrations-transmitted-across-the-net predatory-behaviour variations-in-the-frequency more-marked-effect variations-in-amplitude stage-2 orientation-and-displacement-towards-the-lure stage-3 capture-of-the-lure-with-mandibles larvae-live-in-running-waters catch-with-a-net prey mainly-chironomid-larvae-and-oligochaetes effect-of-vibrations-generated-by-prey-in-the-net very-irregularly-woven-net open-ended-dwelling-tube-at-both-ends vibration-weakly-dampened frequency-does-not-change vibration-excites attention orientation-and-movement capture-attempts orientation-and-movement-to-prey the-faster the-more-the-vibration-exceeds-0.28-Hz frequencies-of-0.15-to-0.28-Hz lead-to-incomplete-reactions as-if-the-larvae-were-confused frequencies-below-0.075-Hz generate-building-movements building-behavior-instead-of-prey-capture closely-connected recruitment-kin-and-spatial-genetic-structure oviposition-and-genetic-relatedness stream-dwelling-caddis beginning-of-the-aquatic-phase four-sample-dates within-one-generation mean-relatedness-coefficient within-reared-egg-masses differed-significantly population-as-a-whole markers-sufficiently-powerful identify-groups-of-siblings small-contribution-from-a-second-male mean-relatedness-within-spatially-structured-groups did-not-differ-from-background siblings-disperse-away-from-each-other kin-structure-does-not-persist changes-in-spatial-genetic-structure-late-in-larval-life neighbouring-larvae-less-closely-related approaching-onset-of-pupation survival-through-egg-stage-and-early-larval-life very-high greater-than-50%non-social-insect consequence-of-colonial-net briefly-occupied-by-first-instar-larvae lack-of-spatial-genetic-structure high-survival refute-patchy-recruitment-hypothesis larva-of-Plectrocnemia-renetta including-discriminatory-matrix larvae-of-Plectrocnemia-Stephens-1836-species-of-Greece morphology-of-final-instar-larva most-important-diagnostic-features-illustrated preliminary-discriminatory-matrix strongly-different-in-length separated-from-each-other muscle-attachment-spots-on-head-capsule number-and-length-of-setae-on-abdominal-sternum-IX reported-from-Cyprus-Turkey-Greek-islands exploit-wide-range-of-ecological-niches five-genomes-published variable-qualities single-Oxford-Nanopore-flow-cell de-novo-assembly-methods-compared assembly-of-low-coverage-Nanopore-reads subsequent-polishing yielded-highest-genome-quality contiguity-and-BUSCO-completeness shortest-genomes-to-date extend-knowledge-of-genome-size genomic-region-encodes-for-light-L-chain-fibroin protein-component-of-larval-caddisfly-silk identified-and-compared new-genomic-resources among-highest-quality-Trichoptera-genomes increase-knowledge basis-for-phylogenomic-and-comparative-genomic-studies revised-key-to-larvae distinguishes-previously-unknown-larva other-two-British-species notes-on-larval-habitat-life-cycle-and-identification-of-adult genetic-population-structure-and-neighbourhood-population-size-estimates role-of-history-and-scale-of-colonisation no-genetic-differentiation-between-sites-up-to-20-km despite-population-sizes-suggesting-genetic-drift genetic-differentiation-between-populations-separated-by-more-than-20-km neighbourhood-population-size-implausibly-small evolutionary-processes-do-not-explain-differentiation relatively-short-flights-by-winged-adults spread-over-number-of-generations found-small-often-temporary-populations grow-and-exchange-genes-with-larger-permanent-local-populations amplify-effects-of-initial-gene-flow substantial-gaps-between-regions-containing-suitable-habitat-patches reduce-number-of-colonisation-events genetic-patterns-may-date-from-time-last-colonised ecological-studies-rarely-examined-dynamics-over-larger-geographical-scales central-to-persistence-and-spread biology-of-Plectrocnemia-latissima rivers-and-streams-of-Central-Caucasus-northern-slopes springs-streams-and-rivers requires-high-oxygen-concentration good-indicator-of-water-quality aspects-of-biology-reported Wikipedia-summary rank-GENUS status-ACCEPTED match-type-HIGHERRANK distribution-records-DK-NO-SE-Vermont-US-US scientific-name authorship-Stephens-1836 classification-Eukaryota-Animalia-Arthropoda-Hexapoda-Insecta-Trichoptera-Hydropsychoidea-Polycentropodidae-Polycentropodinae-Plectrocnemia scientific-name-Plectrocnemia group-caddisflies kingdom-Metazoa instructions fill-all-fields if-a-field-cannot-be-supported-return-null do-not-repeat-information-across-fields keep-each-section-focused-on-its-purpose provide-useful-detail-where-possible critical-rules factual-correctness-over-completeness clarity-over-verbosity usefulness-over-speculation if-information-is-not-clearly-supported-return-null do-not-infer-species-level-traits-from-higher-taxa-unless-explicitly-justified do-not-repeat-the-same-information-across-multiple-fields each-field-must-contain-unique-non-overlapping-content avoid-vague-generalizations like-most-insects typically-feeds-on-plants use-cautious-language-when-necessary has-been-observed is-known-to do-not-fabricate behaviors diet life-cycle-details host-relationships field-intent summary-high-level-overview-3-5-sentences appearance-physical-description-only identification-how-to-distinguish-it-from-similar-taxa habitat-environment-and-conditions distribution-geographic-range-only seasonality-timing-of-activity diet-feeding-habits-null-if-unknown lifeCycle-developmental-stages behavior-notable-actions-or-habits ecologicalRole-role-in-ecosystem humanRelevance-interaction-with-humans similarTaxa-must-include-reason misconceptions-only-if-meaningful extraDetails-only-for-important-additional-context style-rules use-clear-direct-sentences avoid-fluff-or-filler-language avoid-repeating-taxonomy-in-prose avoid-overly-technical-jargon-unless-necessary prefer-concrete-statements-over-abstract-descriptions quality-rules completeness-high-only-if-most-fields-are-well-supported completeness-medium-if-partial-but-reliable completeness-low-if-sparse-data hasInferredContent-true-only-if-generalization-is-used otherwise-false output-format must-strictly-match-provided-JSON-schema do-not-include-any-extra-fields do-not-include-commentary-outside-JSON taxon-record using-provided-schema optional-context-may-be-incomplete source paper-summary-evidence limited-information-extracted-from-abstract-only full-text-not-available-for-more-detailed-extraction habitat-diet-life-cycle-reproduction-behaviors-and-ecosystem-role-not-mentioned-in-abstract distribution-data-limited-to-abstract-level-information full-paper-may-contain-additional-details abstract-only-provided full-text-not-available habitat-diet-and-ecological-details-likely-contained-in-main-paper-but-not-accessible-from-abstract-alone distribution-limited-to-Britain-as-explicitly-stated generate structured-taxon-records entomology-guide accurate-conservative-informative-content prioritize goal produce json schema content summary appearance identification habitat distribution seasonality lifeCycle hostAssociations behavior ecologicalRole humanRelevance similarTaxa misconceptions extraDetails tags completeness hasInferredContent metadata sources sourceQuality extractionMethod extractionDate confidence notes reason name high medium low true false Vibrations-and-Predatory-Behaviour-of-Plectrocnemia-Larvae vibrations net frequency amplitude orientation capture mandibles running-waters dwelling-tube dampened building-movements confused Recruitment-kin-and-the-spatial-genetic-structure-of-a-caddisfly-Plectrocnemia-conspersa microsatellite-loci survival The-larva-of-Plectrocnemia-renetta-Malicky-1975 larva setae abdominal-segment muscle-attachment Ikaria Samos Annotated-Draft-Genomes-of-Two-Caddisfly-Species fibroin Oxford-Nanopore BUSCO A-revised-key-to-larvae-of-the-genus-Plectrocnemia Plectrocnemia-geniculata colonisation dispersal-flights streams rivers 120-described-species Denmark Norway Sweden United-States 204 DK NO SE US taxonomy match kingdom phylum class order family specific-epithet subspecies-epithet subphylum subclass suborder infraorder tribe scientific-name-authorship synonyms common-names content-fields all-fields available-knowledge return-null not-supported unique-non-overlapping focused useful-detail factual correct clear direct no-fluff no-filler no-taxonomy-repetition no-jargon concrete high-completeness medium-completeness low-completeness no-inferred-content strict-JSON no-extra-fields no-commentary entomology insects aquatic vibration genetics population egg pupa instar oxygen Asia America England flowing-water Chironomid oligochaete colonial relatedness sibling Illumina-sequencing annotated silk-protein case-making identification-key morphological diagnostic setal-arrangement muscle-spot abdominal-sternum larval-stage oviposition-site hot-spot survival-rate habitat-patch temporary-population permanent-population winged-adult kin-avoidance refuted water-quality-indicator high-oxygen genus-authority type-species not-specified see-also abstract-only limited-information extraction habitat-not-mentioned diet-not-mentioned life-cycle-not-mentioned reproduction-not-mentioned behaviors-not-mentioned ecosystem-role-not-mentioned distribution-limited abstract-level main-paper additional-details likely-contained not-accessible Britain-explicitly-stated larval-stages-described detailed-extraction predatory captures-prey silken-nets substrate-borne-vibrations chironomid-larvae oligochaetes frequency-effects amplitude-effects orientation-stage capture-stage net-construction confused-responses incomplete-reactions short-range long-range 20-km 500-km colonization-events persistence spread organic-matter material-properties quality genome-size-variation silk-encoding-genes protein-components gene-clusters basis-for-studies distinguishes-species British-species morphological-characteristics taxonomic-revision population-structure neighborhood-size history scale structuring methods differentiation drift trend processes flights generations found grow exchange amplify gaps suitable date examined requires indicator aspects northern slopes Martynov Greek-islands separated-by arrangement number length group-where strongly-different diagnostic-features-illustrated preliminary matrix-provided morphology-of information-on given most-important discriminatory to-the-larvae species-of previously-unknown describes this-paper effects-of-vibrations transmitted-across analyses work this analyses-the-effects variations-in has-a-more-marked-effect especially-on live-in catch-with effect-of generated-by investigated very-irregularly-woven open-at-both-ends weakly-dampened does-not-change excites the-more exceeds lead-to as-if otherwise sometimes-occurs suggests our-objectives examine in-particular look-for any-evidence therefore in-order-to at-the-beginning over-four subsequently-compared reared-from ranged-from indicating-that sufficiently-powerful likely-to-be although could-not-be-excluded did-not-differ suggesting-that very-quickly does-not-persist indicated-that possibly-suggesting some-direct-or-indirect-means when-approaching our-counts suggested-that apparently-very-high may-be-a-consequence all-refute also-provided belong-to can-be-separated with-respect-to has-been-reported members-of provide-important for-example due-to these-form-the-basis only-five published-thus-far with-variable-qualities regarding was-successfully-used of-the compared yielded both-in-terms to-date extend-our-knowledge across was-identified-and-compared with-existing presented-in-this-paper are-among will-increase by-serving-as from-larvae-of are-given-on of-the-adult used-both to-evaluate there-was-no despite given-the implied-that is-implausibly-small do-not-explain at-small-scales could-account-for for-instance may-then over-larger-scales could-reduce may-date-from have-rarely-examined yet-these-processes may-be-central-to from-the-rivers-and-streams aspects-of are-reported-here can-be-used-as high-level-overview 3-5-sentences physical-description-only how-to-distinguish environment-and-conditions geographic-range-only timing-of-activity feeding-habits developmental-stages notable-actions-or-habits role-in-ecosystem interaction-with-humans must-include-reason only-if-meaningful only-for-important-additional-context clear-direct-sentences no-fluff-or-filler no-repeating-taxonomy no-overly-technical-jargon prefer-concrete high-only-if-most-fields-well-supported medium-if-partial-but-reliable low-if-sparse-data true-only-if-generalization-used strictly-match no-commentary-outside-JSON generate-taxon-record taxon Plectrocnemia optional-context may-be-incomplete if-a-field-cannot-be-supported keep-each-section-focused provide-useful-detail factual-correctness clarity verbosity usefulness speculation information-not-clearly-supported do-not-infer-species-level-traits from-higher-taxa unless-explicitly-justified do-not-repeat same-information multiple-fields each-field-must-contain unique-non-overlapping-content use-cautious-language accurate conservative informative structured records scientificName canonicalName scientificNameAuthorship taxonRank commonNames subfamily speciesEpithet subspeciesEpithet

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