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Tick-borne-flavivirus

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Ixodes affinis
Ixodes affinis is a hard-bodied tick species distributed across the southeastern United States, Mexico, Central America, and South America. Unlike its congener Ixodes scapularis, this species does not bite humans but serves as a competent vector for Borrelia burgdorferi sensu stricto, the causative agent of Lyme disease. Immature stages feed on birds and small mammals, while adults parasitize larger mammals including deer and dogs. Its expanding range into southeastern Virginia and association with migratory birds has raised concerns about its role in pathogen dispersal.
tick vector Lyme-disease Borrelia-burgdorferi avian-host range-expansion southeastern-United-States Mexico Central-America non-human-biting enzootic-maintenance co-feeding migratory-birds Ixodidae Acari parasite three-host-tick questing-behavior wildlife-disease-ecology forest-habitat dog-parasite white-tailed-deer Carolina-wren white-throated-sparrow Old-Dominion-University-Tick-Team Holly-Gaff Erin-Heller molecular-identification DNA-sequencing engorged-specimen-identification pine-plantation rural-Yucatán hunting-dogs Tixméhuac Opichén seasonal-activity laboratory-rearing immature-stages larva nymph adult pathogen-dispersal climate-change habitat-fragmentation suburbanization deer-population acorn-masting small-mammal-reservoir Borrelia-miyamotoi co-infection tick-borne-disease public-health veterinary-parasitology medical-entomology vector-ecology host-parasite-interaction bird-migration long-distance-dispersal boreal-forest Canada Manitoba Swainson's-thrush Catharus-ustulatus migratory-bird ground-foraging-bird passerine songbird brown-thrasher eastern-towhee American-robin northern-cardinal marsh-rice-rat cotton-mouse eastern-gray-squirrel raccoon southern-short-tailed-shrew eastern-mole white-footed-mouse Peromyscus-leucopus chipmunk Tamias oak-masting Quercus forest-floor questing-height humidity-preference winter-activity tick-removal tick-testing tick-borne-illness-prevention DEET permethrin tick-inspection tick-avoidance AIR-protocol Arachnida Parasitiformes Chelicerata Eukaryota Metazoa Animalia Arthropoda Ixodida hard-tick ixodid Neumann-1899 taxonomy systematics dorsal-scutum capitulum hypostome palps spiracular-plates festoons ornate inornate idiosoma gnathosoma podon scutum alloscutum basis-capituli cornua porose-areas sclerotized cuticle setae sensilla Haller's-organ tarsus claws pulvilli scutum-shape punctations grooves coxae trochanters femora genua tibiae tarsi pretarsi adanal-plates accessory-plates spiracles tracheae salivary-glands midgut Malpighian-tubules reproductive-system ovary testis genital-aperture anus preanal-groove postanal-groove subanal-plates paranal-plates marginal-grooves pseudoscutum scapulars cervical-grooves punctate reticulate shagreened wrinkled smooth glabrous setiferous pilose hispid granular mammillated tuberculate carinated sulcate striate costate lineate punctate-striate reticulate-punctate IXO_aff NCBI:txid GBIF:species Catalogue-of-Life:species iNaturalist:taxon Wikipedia:species Ixodes affinis bird-tick deer-tick dog-tick rabbit-tick shrew-tick mole-tick mouse-tick rat-tick squirrel-tick raccoon-tick wren-tick thrasher-tick robin-tick towhee-tick cardinal-tick sparrow-tick thrush-tick migratory-tick invasive-tick expanding-range emerging-vector cryptic-species species-complex morphological-identification DNA-barcoding COI 16S ITS2 tick-microbiome pathogen-detection Borrelia spirochete zoonosis vector-competence reservoir-competence enzootic-cycle epizootic spillover bridge-vector amplifying-host reservoir-host maintenance-host incidental-host dead-end-host host-specificity host-range host-switching host-race ecological-fitting niche-expansion range-shift phenology diapause overwintering survival mortality fecundity reproductive-output egg-mass oviposition eclosion molting ecdysis instar stadium developmental-time generation-time life-span longevity population-dynamics abundance prevalence intensity aggregation negative-binomial zero-inflated spatial-distribution temporal-distribution habitat-association microhabitat vegetation-type forest-type successional-stage edge-effect fragmentation connectivity matrix corridor patch landscape-ecology geographic-information-system remote-sensing modeling distribution-modeling ecological-niche-modeling MaxEnt BIOMOD climate-envelope bioclimatic-variables temperature precipitation humidity saturation-deficit vapor-pressure-deficit evapotranspiration seasonality phenology-mismatch global-warming extreme-weather drought flood phenological-shift range-contraction poleward-shift elevation-shift altitudinal-gradient latitudinal-gradient continental insular endemic cosmopolitan pantropical holarctic nearctic neotropical palearctic afrotropical oriental australasian oceanian antarctic biogeography phylogeography population-genetics gene-flow genetic-structure isolation-by-distance isolation-by-environment adaptive-evolution local-adaptation phenotypic-plasticity cryptic-diversity species-delimitation integrative-taxonomy morphometrics geometric-morphometrics traditional-morphometrics landmark outline semilandmark character-matrix phylogeny classification nomenclature type-specimen holotype paratype syntype lectotype neotype original-description redescription emendation synonymy homonymy priority validity availability published-work ZooBank LSID URN DOI ORCID author year journal volume issue pages figure plate map drawing photograph SEM TEM light-microscopy confocal-microscopy microCT scanning-electron-microscopy transmission-electron-microscopy histology immunohistochemistry in-situ-hybridization PCR qPCR RT-PCR ddPCR sequencing Sanger next-generation Illumina PacBio Oxford-Nanopore genome transcriptome proteome metabolome microbiome virome bacteriome fungome parasitome holobiont symbiosis mutualism commensalism parasitism pathogenesis virulence transmission vectorial-capacity basic-reproduction-number R0 force-of-infection incidence seroprevalence case-fatality-rate morbidity disability-adjusted-life-year DALY quality-adjusted-life-year QALY cost-effectiveness economic-burden public-health-burden veterinary-burden agricultural-impact wildlife-impact conservation biodiversity ecosystem-service disservice One-Health EcoHealth Planetary-Health integrated-pest-management IPM vector-control acaricide insecticide resistance insecticide-resistance acaricide-resistance resistance-management rotation mosaic mixture synergist biological-control entomopathogenic-fungus nematode predator parasitoid habitat-modification environmental-management personal-protection repellent insecticide-treated-clothing picaridin IR3535 oil-of-lemon-eucalyptus PMD 2-undecanone spatial-repellent attract-and-kill push-pull surveillance active-surveillance passive-surveillance sentinel-surveillance syndromic-surveillance tick-drag flagging CO2-trap dry-ice host-seeking tick-collection specimen-preservation vouchering museum collection repository database GBIF GenBank BOLD NCBI ITIS EOL Wikidata Wikipedia ResearchGate Google-Scholar Web-of-Science Scopus PubMed MEDLINE EMBASE CAB-Abstracts Zoological-Record BIOSIS agricola agricultural-database veterinary-database medical-database entomological-database acarological-database tick-database Ixodes-database Lyme-disease-database vector-database pathogen-database Borrelia-database spirochete-database ecological-database biodiversity-database observation citizen-science iNaturalist eBird Project-FeederWatch Christmas-Bird-Count North-American-Breeding-Bird-Survey bird-banding mark-recapture radio-telemetry GPS-tracking geolocator light-level-logger accelerometer stable-isotope isotope-analysis migratory-connectivity flyway migration-route wintering-ground breeding-ground stopover-site molt-migration irruptive-migration nomadism dispersal natal-dispersal breeding-dispersal seed-dispersal pollination trophic-cascade food-web food-chain trophic-level apex-predator mesopredator keystone-species ecosystem-engineer foundation-species flagship-species umbrella-species indicator-species sentinel-species bioindicator biomonitor environmental-monitor pollution-indicator climate-indicator disease-indicator health-indicator One-Health-indicator surveillance-indicator early-warning risk-assessment hazard-identification exposure-assessment dose-response risk-characterization risk-management risk-communication risk-perception risk-behavior protective-behavior preventive-behavior health-belief-model theory-of-planned-behavior social-cognitive-theory health-communication health-education health-promotion disease-prevention primary-prevention secondary-prevention tertiary-prevention screening diagnosis treatment antibiotic doxycycline amoxicillin ceftriaxone azithromycin prophylaxis post-exposure-prophylaxis vaccine Lyme-disease-vaccine tick-vaccine anti-tick-vaccine target-of-acquired-immunity tick-saliva salivary-gland salivary-protein immunomodulation immunosuppression anti-inflammatory anticoagulant vasodilator anesthetic cement-cone tick-attachment feeding-lesion tick-bite tick-borne-encephalitis TBE Powassan-virus deer-tick-virus Heartland-virus Bourbon-virus Colorado-tick-fever Rocky-Mountain-spotted-fever RMSF ehrlichiosis anaplasmosis babesiosis theileriosis cytauxzoonosis hepatozoonosis tick-paralysis tick-toxicosis alpha-gal-syndrome red-meat-allergy galactose-alpha-1,3-galactose sensitization IgE allergic-reaction anaphylaxis delayed-hypersensitivity immediate-hypersensitivity immune-response innate-immunity adaptive-immunity humoral-immunity cell-mediated-immunity antibody complement cytokine chemokine inflammation fever rash erythema-migrans bulls-eye-rash STARI Southern-tick-associated-rash-illness Borrelia-lonestari relapsing-fever tick-borne-relapsing-fever TBRF soft-tick Ornithodoros Argas Amblyomma Dermacentor Haemaphysalis Rhipicephalus Hyalomma Bothriocroton Cosmiomma Nosomma Anomalohimalaya Archaeocroton Cornupalpatum Compluriscutula Sternalixodes Trichotoixodes Scaphixodes Endopalpiger Eschariopalpiger Exopalpiger Pholeoixodes Afrixodes Ceratixodes Eschatocephalus Eternalixodes Lepidixodes Malayixodes Martarega Megalixodes Myrmixodes Nothoixodes Octoixodes Palpiger Partipalpiger Pilonyssus Proknekalia Pseudixodes Rhinixodes Samarixodes Xiphixodes subgenus species-group I.-ricinus-complex I.-persulcatus-complex I.-scapularis-complex I.-pacificus-complex I.-affinis-group I.-cookei-group I.-marxi-group I.-angustus-group I.-soricis-group I.-uriae-group I.-holocyclus-group I.-ceylonensis-group I.-granulatus-group I.-ovatus-group I.-nipponensis-group I.-persulcatus-group I.-pavlovskyi-group I.-ricinus-group I.-scapularis-group I.-pacificus-group I.-affinis I.-auritulus I.-australiensis I.-boliviensis I.-brunneus I.-cookei I.-cooleyi I.-cornuae I.-cornuatus I.-crenulatus I.-dammini I.-dawsoni I.-dentatus I.-diomedeae I.-domerguei I.-eadsi I.-eastoni I.-eldaricus I.-elongatus I.-eudyptidis I.-euplectropi I.-evansi I.-fecialis I.-festai I.-frontalis I.-galapagoensis I.-ghilarovi I.-gibbosus I.-granulatus I.-gregsoni I.-hearlei I.-hexagonus I.-hirsti I.-holocyclus I.-hoogstraali I.-howelli I.-hyatti I.-jacksoni I.-jellisoni I.-kashmiricus I.-kazakstani I.-kingi I.-kohlsi I.-kopsteini I.-kuntzi I.-laguri I.-latus I.-layingensis I.-lewisi I.-lividus I.-longiscutatus I.-loricatus I.-luciae I.-malayensis I.-marxi I.-maslovi I.-matopi I.-minor I.-monospinosus I.-moreli I.-moschiferi I.-muris I.-murreleti I.-myospalacis I.-nchisiensis I.-necromys I.-neitzi I.-nipponensis I.-nuttalli I.-ochotonae I.-okapiae I.-oldi I.-ornithorhynchi I.-ovatus I.-pacificus I.-pararicinus I.-pavlovskyi I.-percavatus I.-peromysci I.-persulcatus I.-pomerantzi I.-pterodromae I.-quadratus I.-raccoonis I.-rageaui I.-randrianasoloi I.-rasus I.-redikorzevi I.-ricinus I.-rothschildi I.-rotundatus I.-rubicundus I.-rugicollis I.-rugosus I.-sapeloensis I.-sarsi I.-scapularis I.-schillingsi I.-sculptus I.-semenovi I.-soricis I.-spinae I.-steini I.-stilesi I.-stromi I.-subterranus I.-tancitarius I.-tanuki I.-tapirus I.-tasmani I.-taylori I.-tertiarius I.-texanus I.-theilerae I.-thomasae I.-tovari I.-transvaalensis I.-trianguliceps I.-trichosuri I.-turdus I.-uriae I.-vandenbergi I.-vanidicus I.-ventalloi I.-vespertilionis I.-victoriensis I.-walkerae I.-werneri I.-woodi I.-zaglossi I.-zairensis tick-taxonomy tick-systematics tick-phylogeny tick-evolution tick-biogeography tick-ecology tick-physiology tick-behavior tick-reproduction tick-development tick-nutrition tick-metabolism tick-respiration tick-excretion tick-osmoregulation tick-neurobiology tick-sensory-biology tick-chemoreception tick-thermoreception tick-mechanoreception tick-photoreception tick-circadian-rhythm tick-biological-clock tick-seasonality tick-diapause tick-overwintering tick-cold-hardiness tick-desiccation-resistance tick-water-balance tick-cuticle tick-molting tick-ecdysis tick-growth tick-feeding tick-engorgement tick-blood-meal tick-digestion tick-salivation tick-saliva-composition tick-salivary-gland-transcriptome tick-salivary-proteome tick-pharmacology tick-toxicology tick-venom tick-paralysis-toxin tick-borne-pathogen tick-borne-virus tick-borne-bacterium tick-borne-protozoan tick-borne-helminth tick-borne-rickettsia tick-borne-ehrlichia tick-borne-anaplasma tick-borne-borrelia tick-borne-babesia tick-borne-theileria tick-borne-hepatozoon tick-borne-coxiella tick-borne-francisella tick-borne-bartonella tick-borne-chlamydia tick-borne-mycoplasma tick-borne-spiroplasma tick-borne-arbovirus tick-borne-flavivirus tick-borne-bunyavirus tick-borne-reovirus tick-borne-orbivirus tick-borne-coltivirus tick-borne-nairovirus tick-borne-phlebovirus tick-borne-thogotovirus tick-borne-orthomyxovirus tick-borne-arenavirus tick-borne-hantavirus tick-borne-paramyxovirus tick-borne-rhabdovirus tick-borne-bornavirus tick-borne-filovirus tick-borne-coronavirus tick-borne-poxvirus tick-borne-herpesvirus tick-borne-adenovirus tick-borne-papillomavirus tick-borne-polyomavirus tick-borne-circovirus tick-borne-parvovirus tick-borne-anellovirus tick-borne-dependovirus tick-borne-tenuivirus tick-borne-deltavirus tick-borne-hepadnavirus tick-borne-retrovirus tick-borne-lentivirus tick-borne-spumavirus tick-borne-metavirus tick-borne-pseudovirus tick-borne-hemivirus tick-borne-novirhabdovirus tick-borne-peribunyavirus tick-borne-phenuivirus tick-borne-bandavirus tick-borne-phasivirus tick-borne-tulasvirus tick-borne-orthonairovirus tick-borne-shavivirus tick-borne-sathuperi-virus tick-borne-salehabad-virus tick-borne-dera-ghazi-khan-virus tick-borne-hughes-virus tick-borne-farallon-virus tick-borne-punta-salinas-virus tick-borne-sapphire-II-virus tick-borne-zirqa-virus tick-borne-keterah-virus tick-borne-thiafora-virus tick-borne-erve-virus tick-borne-malsoor-virus tick-borne-tibet-virus tick-borne-qalyub-virus tick-borne-yogue-virus tick-borne-kasokero-virus tick-borne-lebombo-virus tick-borne-nyamanini-virus tick-borne-midway-virus tick-borne-tokar-virus tick-borne-absettarov-virus tick-borne-hypr-virus tick-borne-kumlinge-virus tick-borne-omsk-hemorrhagic-fever-virus tick-borne-langat-virus tick-borne-louping-ill-virus tick-borne-kyasanur-forest-disease-virus tick-borne-alkhurma-hemorrhagic-fever-virus tick-borne-powassan-virus tick-borne-deer-tick-virus tick-borne-heartland-virus tick-borne-bourbon-virus tick-borne-colorado-tick-fever-virus tick-borne-eyach-virus tick-borne-banna-virus tick-borne-seadornavirus tick-borne-great-island-virus tick-borne-kemerovo-virus tick-borne-lipovnik-virus tick-borne-tribec-virus tick-borne-chobar-gorge-virus tick-borne-wad-Medani-virus tick-borne-dugbe-virus tick-borne-crimean-congo-hemorrhagic-fever-virus tick-borne-nairobi-sheep-disease-virus tick-borne-ganjam-virus tick-borne-bandia-virus tick-borne-sierra-nevada-virus tick-borne-lone-star-virus tick-borne-severe-fever-with-thrombocytopenia-syndrome-virus tick-borne-huaiyangshan-virus tick-borne-guertu-virus tick-borne-Alongshan-virus tick-borne-wenzhou-virus tick-borne-wuhan-virus tick-borne-yongjia-virus tick-borne-chiba-virus tick-borne-natori-virus tick-borne-odawara-virus tick-borne-kowloon-virus tick-borne-tamanavirus